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  • Top cofit genes for PS417_13470 from Pseudomonas simiae WCS417

    peptidase
    SEED: ABC-type protease exporter, outer membrane component PrtF/AprF

    Rank Hit Name Description Conserved? Cofitness  
    1 PS417_16130 quercetin 2,3-dioxygenase 0.15 0.24
    2 PS417_03090 type II secretion system protein F no 0.24
    3 PS417_03630 hypothetical protein no 0.24
    4 PS417_11550 FAD-binding oxidoreductase no 0.24
    5 PS417_05450 GNAT family acetyltransferase no 0.23
    6 PS417_06940 MFS transporter permease no 0.21
    7 PS417_18310 hypothetical protein no 0.21
    8 PS417_14945 beta-lactamase no 0.21
    9 PS417_01895 poly(R)-hydroxyalkanoic acid synthase no 0.20
    10 PS417_15105 membrane protein 0.42 0.20
    11 PS417_20705 cbb3-type cytochrome c oxidase subunit II no 0.20
    12 PS417_17210 MFS transporter no 0.20
    13 PS417_14960 ATPase 0.37 0.20
    14 PS417_14965 transcriptional regulator no 0.19
    15 PS417_26565 LysR family transcriptional regulator no 0.19
    16 PS417_08590 hypothetical protein no 0.19
    17 PS417_10635 peptidylprolyl isomerase no 0.19
    18 PS417_17910 APC family amino acid permease no 0.19
    19 PS417_02150 potassium/proton antiporter no 0.19
    20 PS417_10580 glutamine synthetase no 0.19

    Or look for negative cofitness