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  • Top cofit genes for GFF2643 from Variovorax sp. SCN45

    Oxidoreductase, short-chain dehydrogenase/reductase family
    SEED: 3-oxoacyl-[acyl-carrier protein] reductase (EC 1.1.1.100)
    KEGG: 3-oxoacyl-[acyl-carrier protein] reductase

    Rank Hit Name Description Conserved? Cofitness  
    1 GFF1745 Acyl-CoA dehydrogenase no 0.63
    2 GFF107 General secretion pathway protein K no 0.63
    3 GFF7046 FIG00854755: hypothetical protein no 0.62
    4 GFF5266 Transaldolase (EC 2.2.1.2) no 0.60
    5 GFF5281 Xylulose kinase (EC 2.7.1.17) no 0.60
    6 GFF110 pyridoxal-phosphate dependent enzyme family protein no 0.57
    7 GFF6928 Putative transmembrane protein no 0.57
    8 GFF7094 5-carboxymethyl-2-oxo-hex-3- ene-1,7-dioate decarboxylase (EC 4.1.1.68) / 2-hydroxyhepta-2,4-diene-1,7-dioate isomerase (EC 5.3.3.-) no 0.57
    9 GFF6579 Conjugative transfer protein TrbB no 0.57
    10 GFF2646 Acetyl-CoA acetyltransferase no 0.57
    11 GFF5116 Glycolate dehydrogenase (EC 1.1.99.14), subunit GlcD no 0.56
    12 GFF4730 hypothetical protein no 0.56
    13 GFF3463 Urea ABC transporter, permease protein UrtB no 0.55
    14 GFF4861 Butyryl-CoA dehydrogenase (EC 1.3.8.1) no 0.55
    15 GFF2680 Protein of unknown function DUF1058 no 0.54
    16 GFF4925 ATPase component BioM of energizing module of biotin ECF transporter no 0.54
    17 GFF5984 L-lactate dehydrogenase no 0.53
    18 GFF1497 BUG/TctC family periplasmic protein no 0.53
    19 GFF7009 hypothetical protein no 0.52
    20 GFF4945 probable GntR-family transcriptional regulator no 0.52

    Or look for negative cofitness