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Cofit
Protein
Homologs
Top cofit genes for PS417_13440 from
Pseudomonas simiae WCS417
amino acid permease
SEED: probable amino acid permease
Rank
Hit
Name
Description
Conserved?
Cofitness
1
PS417
_17010
AMP-binding protein
0.15
0.24
2
PS417
_18245
hypothetical protein
no
0.22
3
PS417
_05330
fimbrial assembly protein
no
0.21
4
PS417
_19635
lipid kinase
no
0.21
5
PS417
_11955
ligand-gated channel
no
0.21
6
PS417
_05760
phage tail protein
no
0.21
7
PS417
_14815
diguanylate cyclase
no
0.20
8
PS417
_04890
ATP-dependent RNA helicase RhlB
no
0.20
9
PS417
_03930
thymidine phosphorylase
no
0.19
10
PS417
_15170
long-chain fatty acid--CoA ligase
no
0.18
11
PS417
_16870
short-chain dehydrogenase
no
0.18
12
PS417
_17000
MerR family transcriptional regulator
0.15
0.18
13
PS417
_12335
cobalt transporter
no
0.18
14
PS417
_18220
phenylacetaldoxime dehydratase
no
0.18
15
PS417
_15410
hypothetical protein
no
0.18
16
PS417
_20585
chemotaxis protein
no
0.18
17
PS417
_23580
peptidylprolyl isomerase
0.49
0.18
18
PS417
_14155
branched-chain amino acid ABC transporter permease
no
0.17
19
PS417
_08640
sodium:proton antiporter
no
0.17
20
PS417
_04015
choline ABC transporter permease
no
0.17
Or look for
negative cofitness