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  • Top cofit genes for GFF263 from Variovorax sp. SCN45

    Secreted and surface protein containing fasciclin-like repeats
    SEED: Secreted and surface protein containing fasciclin-like repeats

    Rank Hit Name Description Conserved? Cofitness  
    1 GFF5027 Aldehyde dehydrogenase B (EC 1.2.1.22) 0.37 0.60
    2 GFF6560 no description no 0.57
    3 GFF2854 D-malate dehydrogenase [decarboxylating] (EC 1.1.1.83) 0.62 0.52
    4 GFF5161 Glutathione S-transferase (EC 2.5.1.18) no 0.49
    5 GFF5191 Galactose-binding protein regulator no 0.48
    6 GFF432 Probable transcription regulator protein of MDR efflux pump cluster no 0.48
    7 GFF1402 3-demethylubiquinone-9 3-methyltransferase no 0.47
    8 GFF2944 Acetyltransferase no 0.47
    9 GFF2170 Branched-chain amino acid ABC transporter, ATP-binding protein LivF (TC 3.A.1.4.1) no 0.47
    10 GFF4262 hypothetical protein no 0.47
    11 GFF542 no description no 0.46
    12 GFF1781 Two-component transcriptional response regulator, LuxR family no 0.46
    13 GFF4856 3-methylmercaptopropionyl-CoA dehydrogenase (DmdC) no 0.46
    14 GFF5300 ABC transporter, permease protein (cluster 10, nitrate/sulfonate/bicarbonate) no 0.45
    15 GFF6281 hypothetical protein no 0.45
    16 GFF3356 Probable transmembrane protein no 0.45
    17 GFF1954 no description no 0.45
    18 GFF6175 hypothetical protein 0.55 0.44
    19 GFF6564 hypothetical protein no 0.44
    20 GFF7310 tRNA-(cytosine32)-2-thiocytidine synthetase TtcA no 0.44

    Or look for negative cofitness