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  • Top cofit genes for PS417_13375 from Pseudomonas simiae WCS417

    LysR family transcriptional regulator
    SEED: Transcriptional regulator MexT

    Rank Hit Name Description Conserved? Cofitness  
    1 PS417_22670 AraC family transcriptional regulator 0.32 0.29
    2 PS417_13190 transporter 0.93 0.28
    3 PS417_05090 ferric citrate outer membrane transporter (fecA) (from data) no 0.23
    4 PS417_24780 peptidase C13 0.35 0.23
    5 PS417_08060 proline iminopeptidase no 0.21
    6 PS417_19380 glutathione S-transferase no 0.20
    7 PS417_21285 hypothetical protein 0.44 0.20
    8 PS417_23155 pilus assembly protein PilW 0.70 0.20
    9 PS417_27605 hypothetical protein 0.30 0.20
    10 PS417_26525 DEAD/DEAH box helicase no 0.20
    11 PS417_02530 iron ABC transporter substrate-binding protein no 0.19
    12 PS417_27610 hypothetical protein 0.25 0.19
    13 PS417_07950 MFS transporter no 0.19
    14 PS417_19185 toxin no 0.19
    15 PS417_16915 hemolysin D no 0.19
    16 PS417_08835 ABC transporter 0.72 0.19
    17 PS417_28250 cell wall assembly protein no 0.18
    18 PS417_00190 LysR family transcriptional regulator 0.57 0.18
    19 PS417_16910 multidrug resistance protein B no 0.18
    20 PS417_14035 lactoylglutathione lyase no 0.18

    Or look for negative cofitness