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Gene
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Cofit
Protein
Homologs
Top cofit genes for GFF2621 from
Variovorax sp. SCN45
YidE/YbjL duplication
SEED: putative transport protein
Rank
Hit
Name
Description
Conserved?
Cofitness
1
GFF3139
NAD-dependent protein deacetylase of SIR2 family
no
0.56
2
GFF4007
Glutamate carboxypeptidase (EC 3.4.17.11)
no
0.46
3
GFF6566
hypothetical protein
no
0.46
4
GFF1274
Glutamate racemase (EC 5.1.1.3)
no
0.45
5
GFF5999
DNA polymerase IV (EC 2.7.7.7)
no
0.43
6
GFF6351
T6SS associated component TagF (ImpM)
no
0.42
7
GFF7166
Glyoxalase family protein
no
0.42
8
GFF7085
BUG/TctC family periplasmic protein
no
0.41
9
GFF2902
ABC transporter, substrate-binding protein (cluster 13, osmolytes) / ABC transporter, permease protein (cluster 13, osmolytes)
no
0.41
10
GFF7069
Transcriptional regulator
no
0.41
11
GFF1954
no description
no
0.41
12
GFF2653
Cytochrome d ubiquinol oxidase subunit I (EC 1.10.3.-)
no
0.40
13
GFF4499
Uncharacterized DUF1427 protein PA2697
no
0.40
14
GFF5162
Mg(2+)-transport-ATPase-associated protein MgtC
no
0.39
15
GFF3407
MaoC domain protein
no
0.39
16
GFF4069
DNA-binding heavy metal response regulator
no
0.39
17
GFF3759
Uridine kinase family protein YggC homolog
no
0.39
18
GFF5857
Fe2+-dicitrate sensor, membrane component
no
0.39
19
GFF3771
no description
no
0.39
20
GFF4915
hypothetical protein
no
0.38
Or look for
negative cofitness