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  • Top cofit genes for GFF2613 from Variovorax sp. SCN45

    no description

    Rank Hit Name Description Conserved? Cofitness  
    1 GFF2182 Inner membrane component of TAM transport system no 0.63
    2 GFF2303 Uncharacterized DUF2909 protein BB4826 no 0.58
    3 GFF1447 hypothetical protein no 0.57
    4 GFF4373 FIG131328: Predicted ATP-dependent endonuclease of the OLD family no 0.56
    5 GFF5040 3-hydroxypropionate dehydrogenase DddA, flavin-containing (EC 1.1.1.59) no 0.55
    6 GFF2213 Flp pilus assembly protein, pilin Flp no 0.55
    7 GFF7146 Putative oxidoreductase in 4-hydroxyproline catabolic gene cluster no 0.54
    8 GFF2183 Outer membrane component of TAM transport system no 0.54
    9 GFF5211 Alkaline phosphatase (EC 3.1.3.1) no 0.54
    10 GFF4069 DNA-binding heavy metal response regulator no 0.53
    11 GFF5057 Peptidoglycan D,D-transpeptidase MrdA (EC 3.4.16.4) no 0.52
    12 GFF5605 D-xylose ABC transporter, ATP-binding protein XylG no 0.51
    13 GFF3851 Uncharacterized MFS-type transporter no 0.51
    14 GFF6156 Aerobic carbon monoxide dehydrogenase (quinone), medium chain (EC 1.2.5.3) no 0.50
    15 GFF6208 Cytosine/purine/uracil/thiamine/allantoin permease family protein no 0.50
    16 GFF4986 3-hydroxybenzoate 6-monooxygenase (EC 1.14.13.24) no 0.50
    17 GFF4185 RNA polymerase ECF-type sigma factor no 0.50
    18 GFF592 Glutamyl-Q tRNA(Asp) synthetase no 0.49
    19 GFF415 hypothetical protein no 0.49
    20 GFF6513 Phosphogluconate dehydratase (EC 4.2.1.12) no 0.49

    Or look for negative cofitness