• Private Fitness
  • Home
  • Find Gene
  • BLAST
  • Experiments
  • Organisms
  • Help
  • Gene
  • Fitness
  • Nearby
  • Cofit
  • Protein
  • Homologs
  • Top cofit genes for GFF2600 from Variovorax sp. SCN45

    Shikimate 5-dehydrogenase I alpha (EC 1.1.1.25)
    SEED: Shikimate 5-dehydrogenase I alpha (EC 1.1.1.25)
    KEGG: shikimate dehydrogenase

    Rank Hit Name Description Conserved? Cofitness  
    1 GFF332 hypothetical protein no 0.58
    2 GFF7278 Transposase no 0.58
    3 GFF2466 no description no 0.56
    4 GFF607 D-3-phosphoglycerate dehydrogenase (EC 1.1.1.95) no 0.55
    5 GFF2446 FIG00956403: hypothetical protein no 0.53
    6 GFF734 no description no 0.52
    7 GFF5178 Transcriptional regulator, Xre-family with cupin domain no 0.52
    8 GFF686 porin, Gram-negative type no 0.50
    9 GFF4650 Transcriptional regulator, PadR family no 0.49
    10 GFF412 Transcription-repair coupling factor no 0.49
    11 GFF2147 no description no 0.49
    12 GFF1460 Enoyl-CoA hydratase/isomerase no 0.49
    13 GFF5621 ABC transporter, permease protein 1 (cluster 4, leucine/isoleucine/valine/benzoate) no 0.47
    14 GFF7080 no description no 0.47
    15 GFF189 Negative transcriptional regulator no 0.46
    16 GFF3459 Aliphatic amidase AmiE (EC 3.5.1.4) no 0.46
    17 GFF755 Type II secretory pathway, ATPase PulE/Tfp pilus assembly pathway, ATPase PilB no 0.45
    18 GFF6020 UPF0246 protein YaaA no 0.44
    19 GFF2893 Flavodoxin reductases (ferredoxin-NADPH reductases) family 1; Vanillate O-demethylase oxidoreductase (EC 1.14.13.-) no 0.44
    20 GFF586 Pirin no 0.44

    Or look for negative cofitness