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  • Top cofit genes for GFF2591 from Variovorax sp. SCN45

    Virulence factor mviM
    SEED: Virulence factor mviM
    KEGG: hypothetical protein

    Rank Hit Name Description Conserved? Cofitness  
    1 GFF907 Transcriptional regulator, LysR family no 0.59
    2 GFF7133 Catalase-like heme-binding protein no 0.56
    3 GFF5346 Putative outer membrane lipoprotein 0.67 0.54
    4 GFF6660 Multidrug efflux system MdtABC-TolC, membrane fusion component MdtA no 0.53
    5 GFF2487 Two-component system sensor histidine kinase/response regulator hybrid no 0.52
    6 GFF6961 Cytochrome c oxidase (cbb3-type) subunit CcoP (EC 1.9.3.1) no 0.52
    7 GFF2345 Uncharacterized ferredoxin-like protein YfhL 0.66 0.52
    8 GFF1662 Transcriptional regulator, GntR family domain / Aspartate aminotransferase (EC 2.6.1.1) no 0.50
    9 GFF6639 no description no 0.49
    10 GFF1572 Transcriptional regulator, LysR family no 0.49
    11 GFF7269 Altronate dehydratase (EC 4.2.1.7) no 0.49
    12 GFF6452 Putative diheme cytochrome c-553 0.61 0.48
    13 GFF2388 hypothetical protein no 0.48
    14 GFF6822 Peptidase C14, caspase catalytic subunit p20 no 0.47
    15 GFF3109 Methionine ABC transporter substrate-binding protein no 0.47
    16 GFF6980 Mobile element protein no 0.47
    17 GFF6950 Acetoacetyl-CoA reductase (EC 1.1.1.36) no 0.46
    18 GFF5786 Transcriptional regulator, LuxR family no 0.46
    19 GFF1441 putative membrane protein no 0.46
    20 GFF1348 Oxidoreductase, short-chain dehydrogenase/reductase family no 0.46

    Or look for negative cofitness