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  • Top cofit genes for PS417_13195 from Pseudomonas simiae WCS417

    RND transporter MFP subunit
    SEED: Multidrug efflux membrane fusion protein MexE

    Rank Hit Name Description Conserved? Cofitness  
    1 PS417_01355 membrane protein 0.15 0.27
    2 PS417_05785 tail protein no 0.25
    3 PS417_14480 glycogen synthase 0.34 0.24
    4 PS417_03025 penicillin-binding protein 1C no 0.24
    5 PS417_03815 DNA transporter no 0.23
    6 PS417_14395 fe2+ zn2+ uptake regulation protein no 0.23
    7 PS417_05830 hypothetical protein no 0.23
    8 PS417_22700 RNA polymerase subunit sigma-24 0.23 0.23
    9 PS417_20975 protein kinase no 0.22
    10 PS417_26575 LysR family transcriptional regulator no 0.21
    11 PS417_13190 transporter 0.98 0.21
    12 PS417_12395 aminopeptidase N 0.70 0.20
    13 PS417_22270 hypothetical protein 0.58 0.20
    14 PS417_05780 hypothetical protein no 0.20
    15 PS417_20980 uroporphyrin-III methyltransferase 0.92 0.20
    16 PS417_04735 LysR family transcriptional regulator 0.51 0.20
    17 PS417_24355 MFS transporter 0.27 0.20
    18 PS417_05705 pyocin R2, holin 0.28 0.19
    19 PS417_03015 hypothetical protein 0.28 0.19
    20 PS417_05695 transcriptional regulator no 0.19

    Or look for negative cofitness