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Cofit
Protein
Homologs
Top cofit genes for PS417_13190 from
Pseudomonas simiae WCS417
transporter
SEED: Multidrug efflux transporter MexF
Rank
Hit
Name
Description
Conserved?
Cofitness
1
PS417
_13375
LysR family transcriptional regulator
0.93
0.28
2
PS417
_18770
hypothetical protein
0.64
0.24
3
PS417
_04740
RND transporter
no
0.23
4
PS417
_15165
1-carboxy-3-chloro-3,4-dihydroxycyclo hexa-1,5-diene dehydrogenase
no
0.21
5
PS417
_13195
RND transporter MFP subunit
0.98
0.21
6
PS417
_08635
ammonium transporter
0.24
0.21
7
PS417
_18420
deoxyribonuclease
0.44
0.20
8
PS417
_08355
glycosylase
no
0.20
9
PS417
_08780
ion transporter
no
0.19
10
PS417
_24205
hypothetical protein
no
0.19
11
PS417
_04755
membrane protein
0.56
0.19
12
PS417
_27275
hypothetical protein
no
0.19
13
PS417
_04745
fusaric acid resistance protein
0.14
0.19
14
PS417
_07625
helicase
0.52
0.19
15
PS417
_27815
hypothetical protein
0.32
0.18
16
PS417
_09030
alpha/beta hydrolase
0.39
0.18
17
PS417
_14920
CoA-transferase
no
0.18
18
PS417
_14335
lysine transporter LysE
no
0.18
19
PS417
_16130
quercetin 2,3-dioxygenase
no
0.17
20
PS417
_03650
FAD-dependent oxidoreductase
0.36
0.17
Or look for
negative cofitness