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  • Top cofit genes for PS417_13185 from Pseudomonas simiae WCS417

    RND transporter
    SEED: Outer membrane protein OprN

    Rank Hit Name Description Conserved? Cofitness  
    1 PS417_23770 exodeoxyribonuclease V subunit alpha no 0.24
    2 PS417_01420 histidine kinase no 0.23
    3 PS417_01395 biofilm formation protein PelB no 0.23
    4 PS417_20960 Nitrate-binding regulatory protein (nasS) (from data) no 0.23
    5 PS417_01415 glycosyl transferase family 1 no 0.22
    6 PS417_02435 flagellar motor protein MotA 0.83 0.21
    7 PS417_01405 sugar transporter no 0.21
    8 PS417_01400 hypothetical protein no 0.20
    9 PS417_10955 porin no 0.20
    10 PS417_19650 chemotaxis protein CheW 0.38 0.20
    11 PS417_05635 membrane protein 0.43 0.20
    12 PS417_21575 chemotaxis protein 0.55 0.19
    13 PS417_15260 protein phosphatase no 0.19
    14 PS417_19825 ATPase AAA 0.45 0.19
    15 PS417_01410 transporter no 0.19
    16 PS417_19020 dimethylmenaquinone methyltransferase 0.23 0.18
    17 PS417_06645 RNA polymerase-associated protein RapA 0.43 0.18
    18 PS417_19475 pseudouridine synthase no 0.18
    19 PS417_26055 cyclic nucleotide-binding protein no 0.18
    20 PS417_02440 flagellar motor protein MotB 0.80 0.18

    Or look for negative cofitness