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  • Top cofit genes for PS417_13180 from Pseudomonas simiae WCS417

    AraC family transcriptional regulator

    Rank Hit Name Description Conserved? Cofitness  
    1 PS417_13850 2-methylbutanoyl-CoA dehydrogenase (EC 1.3.8.5) (from data) 0.92 0.52
    2 PS417_17560 Dihydrolipoyl dehydrogenase (EC 1.8.1.4) (from data) 0.72 0.44
    3 PS417_17550 branched-chain alpha-ketoacid dehydrogenase, E1 component beta subunit (EC 1.2.4.4) (from data) 0.63 0.43
    4 PS417_13855 acetyl-CoA acetyltransferase 0.91 0.38
    5 PS417_17565 branched-chain amino acid aminotransferase 0.52 0.36
    6 PS417_17545 2-oxoisovalerate dehydrogenase 0.66 0.33
    7 PS417_21065 3-methylitaconate isomerase 0.50 0.32
    8 PS417_21070 aconitate hydratase 0.50 0.30
    9 PS417_21275 GntR family transcriptional regulator 0.49 0.24
    10 PS417_01180 ribosomal protein S6 modification protein 0.47 0.23
    11 PS417_22520 histidine kinase 0.29 0.19
    12 PS417_20580 isocitrate dehydrogenase 0.35 0.19
    13 PS417_11430 EamA no 0.19
    14 PS417_10535 hypothetical protein no 0.18
    15 PS417_07640 glyceraldehyde-3-phosphate dehydrogenase 0.67 0.18
    16 PS417_11160 6-aminohexanoate hydrolase no 0.18
    17 PS417_15495 FAD-dependent oxidoreductase no 0.18
    18 PS417_15935 Rrf2 family transcriptional regulator 0.20 0.18
    19 PS417_13835 3-hydroxyisobutyryl-CoA hydrolase (EC 3.1.2.4) (from data) 0.35 0.18
    20 PS417_27815 hypothetical protein 0.31 0.17

    Or look for negative cofitness