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Cofit
Protein
Homologs
Top cofit genes for GFF2583 from
Variovorax sp. SCN45
putative lipoprotein
SEED: Probable lipoprotein
Rank
Hit
Name
Description
Conserved?
Cofitness
1
GFF6017
NADPH-dependent 7-cyano-7-deazaguanine reductase (EC 1.7.1.13)
no
0.68
2
GFF1861
Transcriptional regulator, IclR family
no
0.64
3
GFF7306
FolM Alternative dihydrofolate reductase 1
0.41
0.62
4
GFF2576
6-carboxy-5,6,7,8-tetrahydropterin synthase (EC 4.1.2.50)
0.30
0.62
5
GFF5214
7-cyano-7-deazaguanine synthase (EC 6.3.4.20)
no
0.59
6
GFF341
ATP-dependent Clp protease ATP-binding subunit ClpA
no
0.55
7
GFF5341
Efflux ABC transporter, permease protein
no
0.52
8
GFF5288
Uncharacterized protein PA4513
no
0.50
9
GFF6324
Kup system potassium uptake protein
no
0.50
10
GFF3507
Transcriptional regulator, DeoR family
no
0.49
11
GFF4551
Putative preQ0 transporter YhhQ
no
0.49
12
GFF5464
Transcriptional regulator, AcrR family
no
0.49
13
GFF3613
Protein of unknown function DUF55
no
0.49
14
GFF1107
NAD(FAD)-utilizing dehydrogenases
no
0.49
15
GFF4145
transcriptional regulators-like protein
no
0.49
16
GFF1165
2-isopropylmalate synthase (EC 2.3.3.13)
no
0.48
17
GFF1862
Adenosine deaminase (EC 3.5.4.4)
no
0.48
18
GFF4853
Transcriptional regulator, LysR family
no
0.48
19
GFF1845
Nucleoside ABC transporter, permease protein 1
0.29
0.47
20
GFF237
ABC-type branched-chain amino acid transport systems, periplasmic component
no
0.47
Or look for
negative cofitness