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  • Top cofit genes for GFF2583 from Variovorax sp. SCN45

    putative lipoprotein
    SEED: Probable lipoprotein

    Rank Hit Name Description Conserved? Cofitness  
    1 GFF6017 NADPH-dependent 7-cyano-7-deazaguanine reductase (EC 1.7.1.13) no 0.68
    2 GFF1861 Transcriptional regulator, IclR family no 0.64
    3 GFF7306 FolM Alternative dihydrofolate reductase 1 0.41 0.62
    4 GFF2576 6-carboxy-5,6,7,8-tetrahydropterin synthase (EC 4.1.2.50) 0.27 0.62
    5 GFF5214 7-cyano-7-deazaguanine synthase (EC 6.3.4.20) no 0.59
    6 GFF341 ATP-dependent Clp protease ATP-binding subunit ClpA no 0.55
    7 GFF5341 Efflux ABC transporter, permease protein no 0.52
    8 GFF5288 Uncharacterized protein PA4513 no 0.50
    9 GFF6324 Kup system potassium uptake protein no 0.50
    10 GFF3507 Transcriptional regulator, DeoR family no 0.49
    11 GFF4551 Putative preQ0 transporter YhhQ no 0.49
    12 GFF5464 Transcriptional regulator, AcrR family no 0.49
    13 GFF3613 Protein of unknown function DUF55 no 0.49
    14 GFF1107 NAD(FAD)-utilizing dehydrogenases no 0.49
    15 GFF4145 transcriptional regulators-like protein no 0.49
    16 GFF1165 2-isopropylmalate synthase (EC 2.3.3.13) no 0.48
    17 GFF1862 Adenosine deaminase (EC 3.5.4.4) no 0.48
    18 GFF4853 Transcriptional regulator, LysR family no 0.48
    19 GFF1845 Nucleoside ABC transporter, permease protein 1 0.29 0.47
    20 GFF237 ABC-type branched-chain amino acid transport systems, periplasmic component no 0.47

    Or look for negative cofitness