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  • Top cofit genes for PS417_13125 from Pseudomonas simiae WCS417

    ATP-dependent DNA ligase
    SEED: ATP-dependent DNA ligase (EC 6.5.1.1) clustered with Ku protein, LigD
    KEGG: DNA ligase (ATP)

    Rank Hit Name Description Conserved? Cofitness  
    1 PS417_13805 4-amino-4-deoxy-L-arabinose transferase no 0.22
    2 PS417_06245 zinc metallopeptidase RseP no 0.22
    3 PS417_13790 UDP phosphate 4-deoxy-4-formamido-L-arabinose transferase 0.41 0.21
    4 PS417_02145 potassium transporter KefA no 0.20
    5 PS417_13795 UDP-4-amino-4-deoxy-L-arabinose formyltransferase no 0.20
    6 PS417_14960 ATPase no 0.20
    7 PS417_15815 hydrolase no 0.19
    8 PS417_24835 hypothetical protein no 0.19
    9 PS417_13820 UDP-glucose 6-dehydrogenase no 0.19
    10 PS417_17745 gluconolactonase no 0.19
    11 PS417_10595 MFS transporter no 0.18
    12 PS417_10120 hypothetical protein no 0.18
    13 PS417_27050 ABC transporter substrate-binding protein no 0.18
    14 PS417_09045 histidine kinase no 0.18
    15 PS417_21515 transcriptional regulator no 0.18
    16 PS417_01995 hypothetical protein no 0.18
    17 PS417_02405 hypothetical protein no 0.18
    18 PS417_08205 acetyltransferase no 0.18
    19 PS417_21125 phosphoadenosine phosphosulfate reductase no 0.18
    20 PS417_19440 purine permease no 0.17

    Or look for negative cofitness