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  • Top cofit genes for PS417_13120 from Pseudomonas simiae WCS417

    aspartyl beta-hydroxylase
    SEED: Fe(2+)/alpha-ketoglutarate-dependent dioxygenase LpxO
    KEGG: beta-hydroxylase

    Rank Hit Name Description Conserved? Cofitness  
    1 PS417_07510 aspartyl beta-hydroxylase 0.84 0.60
    2 PS417_03275 mammalian cell entry protein 0.53 0.48
    3 PS417_01550 cell envelope biogenesis protein AsmA 0.51 0.41
    4 PS417_24780 peptidase C13 0.41 0.41
    5 PS417_02255 lipopolysaccharide kinase 0.74 0.41
    6 PS417_13825 glycosyltransferase no 0.36
    7 PS417_03265 paraquat-inducible protein A 0.45 0.34
    8 PS417_03270 paraquat-inducible protein A 0.50 0.34
    9 PS417_06775 antibiotic transporter 0.63 0.33
    10 PS417_06770 multidrug transporter 0.71 0.32
    11 PS417_28070 phosphate ABC transporter ATP-binding protein 0.76 0.31
    12 PS417_02385 esterase 0.78 0.31
    13 PS417_08380 ABC transporter ATP-binding protein no 0.31
    14 PS417_22065 Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3) (from data) no 0.30
    15 PS417_20130 dehydrogenase 0.33 0.30
    16 PS417_25975 Acyl-CoA dehydrogenase (EC 1.3.8.7) (from data) 0.49 0.30
    17 PS417_03625 lipid A 3-O-deacylase 0.70 0.30
    18 PS417_25960 Acyl-CoA dehydrogenase (EC 1.3.8.7) (from data) 0.38 0.29
    19 PS417_27295 hypothetical protein no 0.28
    20 PS417_27785 phosphoglucomutase 0.64 0.27

    Or look for negative cofitness