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  • Top cofit genes for GFF2563 from Variovorax sp. SCN45

    Two-component system sensor histidine kinase
    SEED: Sensor histidine kinase

    Rank Hit Name Description Conserved? Cofitness  
    1 GFF4790 Nudix-related transcriptional regulator NrtR no 0.88
    2 GFF3621 Magnesium and cobalt transport protein CorA no 0.85
    3 GFF236 Two-component transcriptional response regulator receiver domain no 0.82
    4 GFF3624 Putative transmembrane protein no 0.81
    5 GFF651 Phytochrome, two-component sensor histidine kinase (EC 2.7.3.-) no 0.79
    6 GFF3625 Ferredoxin, 2Fe-2S no 0.78
    7 GFF3618 Transcriptional regulator, LysR family no 0.70
    8 GFF649 no description no 0.70
    9 GFF3619 no description no 0.70
    10 GFF4625 Undecaprenyl-phosphate alpha-N-acetylglucosaminyl 1-phosphate transferase (EC 2.7.8.33) no 0.64
    11 GFF3627 D-alanyl-D-alanine carboxypeptidase (EC 3.4.16.4) no 0.62
    12 GFF4626 dTDP-Rha:A-D-GlcNAc-diphosphoryl polyprenol, A-3-L-rhamnosyl transferase WbbL no 0.61
    13 GFF371 RNA-binding protein YhbY no 0.59
    14 GFF2356 RNase adapter protein RapZ 0.45 0.59
    15 GFF399 3'-to-5' exoribonuclease RNase R 0.67 0.57
    16 GFF5208 Efflux ABC transporter, permease/ATP-binding protein Reut_A2584 0.41 0.56
    17 GFF5076 hypothetical protein no 0.55
    18 GFF3616 2-hydroxychromene-2-carboxylate isomerase family protein no 0.53
    19 GFF409 Osmolarity sensory histidine kinase EnvZ 0.42 0.52
    20 GFF2252 RNA-2',3'-PO4:RNA-5'-OH ligase no 0.52

    Or look for negative cofitness