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Cofit
Protein
Homologs
Top cofit genes for GFF2562 from
Variovorax sp. SCN45
UPF0391 membrane protein RGE_28580
SEED: putative membrane protein
Rank
Hit
Name
Description
Conserved?
Cofitness
1
GFF5729
Methyl-accepting chemotaxis sensor/transducer protein
no
0.65
2
GFF6126
putative membrane protein
no
0.63
3
GFF1815
Uricase (urate oxidase) (EC 1.7.3.3)
no
0.62
4
GFF1336
ABC transporter, substrate-binding protein RSc1750
no
0.60
5
GFF3904
Probable signal peptide protein
no
0.60
6
GFF7376
Transcriptional regulator, LysR family
no
0.59
7
GFF5831
Ketosteroid isomerase-related protein
no
0.59
8
GFF3395
Benzoate ABC transporter, permease protein 2
no
0.58
9
GFF1636
Non-ribosomal peptide synthetase modules, pyoverdine @ Siderophore biosynthesis non-ribosomal peptide synthetase modules
no
0.57
10
GFF252
Zinc-type alcohol dehydrogenase-like protein
no
0.56
11
GFF4490
Site-specific tyrosine recombinase XerC
no
0.56
12
GFF4611
Predicted transcriptional regulator for fatty acid degradation FadP, TetR family
no
0.55
13
GFF6556
hypothetical protein
no
0.55
14
GFF6704
no description
no
0.55
15
GFF2543
Uncharacterized membrane protein Bcep18194_A6058
no
0.54
16
GFF5451
Membrane-bound lytic murein transglycosylase A
no
0.53
17
GFF7239
Repair of Iron Centers di-iron protein
no
0.53
18
GFF5092
2-hydroxyhepta-2,4-diene-1,7-dioate isomerase (EC 5.3.3.-)
no
0.53
19
GFF3779
hypothetical protein
no
0.53
20
GFF7245
universal stress protein, UspA family
no
0.53
Or look for
negative cofitness