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  • Top cofit genes for GFF2562 from Variovorax sp. SCN45

    UPF0391 membrane protein RGE_28580
    SEED: putative membrane protein

    Rank Hit Name Description Conserved? Cofitness  
    1 GFF5729 Methyl-accepting chemotaxis sensor/transducer protein no 0.65
    2 GFF6126 putative membrane protein no 0.63
    3 GFF1815 Uricase (urate oxidase) (EC 1.7.3.3) no 0.62
    4 GFF1336 ABC transporter, substrate-binding protein RSc1750 no 0.60
    5 GFF3904 Probable signal peptide protein no 0.60
    6 GFF7376 Transcriptional regulator, LysR family no 0.59
    7 GFF5831 Ketosteroid isomerase-related protein no 0.59
    8 GFF3395 Benzoate ABC transporter, permease protein 2 no 0.58
    9 GFF1636 Non-ribosomal peptide synthetase modules, pyoverdine @ Siderophore biosynthesis non-ribosomal peptide synthetase modules no 0.57
    10 GFF252 Zinc-type alcohol dehydrogenase-like protein no 0.56
    11 GFF4490 Site-specific tyrosine recombinase XerC no 0.56
    12 GFF4611 Predicted transcriptional regulator for fatty acid degradation FadP, TetR family no 0.55
    13 GFF6556 hypothetical protein no 0.55
    14 GFF6704 no description no 0.55
    15 GFF2543 Uncharacterized membrane protein Bcep18194_A6058 no 0.54
    16 GFF5451 Membrane-bound lytic murein transglycosylase A no 0.53
    17 GFF7239 Repair of Iron Centers di-iron protein no 0.53
    18 GFF5092 2-hydroxyhepta-2,4-diene-1,7-dioate isomerase (EC 5.3.3.-) no 0.53
    19 GFF3779 hypothetical protein no 0.53
    20 GFF7245 universal stress protein, UspA family no 0.53

    Or look for negative cofitness