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  • Top cofit genes for GFF2557 from Variovorax sp. SCN45

    transport-associated
    SEED: transport-associated

    Rank Hit Name Description Conserved? Cofitness  
    1 GFF61 GDP-mannose 4,6-dehydratase (EC 4.2.1.47) no 0.55
    2 GFF3307 FIG01161751: hypothetical protein no 0.55
    3 GFF3372 hypothetical protein no 0.54
    4 GFF2083 putative periplasmic membrane protein no 0.53
    5 GFF4926 Probable carboxyvinyl-carboxyphosphonate phosphorylmutase (EC 2.7.8.23) no 0.53
    6 GFF1243 transglutaminase, N-terminal domain protein no 0.51
    7 GFF5874 hypothetical protein no 0.51
    8 GFF6732 High-affinity branched-chain amino acid transport system permease protein LivH (TC 3.A.1.4.1) no 0.50
    9 GFF2948 salicylate esterase no 0.50
    10 GFF5589 Methionine aminopeptidase (EC 3.4.11.18) no 0.49
    11 GFF5239 hypothetical protein no 0.49
    12 GFF3402 no description no 0.48
    13 GFF1975 hypothetical protein no 0.48
    14 GFF6081 Peptidase S1 and S6, chymotrypsin/Hap no 0.48
    15 GFF1744 Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3) no 0.48
    16 GFF1963 Transcriptional regulator, AsnC family no 0.47
    17 GFF3502 hypothetical protein no 0.47
    18 GFF881 Transcriptional regulator ligR, LysR family 0.34 0.47
    19 GFF6347 AAA+ ATPase superfamily protein YifB/ComM, associated with DNA recombination no 0.47
    20 GFF2161 Dihydroorotase (EC 3.5.2.3) no 0.47

    Or look for negative cofitness