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Cofit
Protein
Homologs
Top cofit genes for GFF2557 from
Variovorax sp. SCN45
transport-associated
SEED: transport-associated
Rank
Hit
Name
Description
Conserved?
Cofitness
1
GFF61
GDP-mannose 4,6-dehydratase (EC 4.2.1.47)
no
0.55
2
GFF3307
FIG01161751: hypothetical protein
no
0.55
3
GFF3372
hypothetical protein
no
0.54
4
GFF2083
putative periplasmic membrane protein
no
0.53
5
GFF4926
Probable carboxyvinyl-carboxyphosphonate phosphorylmutase (EC 2.7.8.23)
no
0.53
6
GFF1243
transglutaminase, N-terminal domain protein
no
0.51
7
GFF5874
hypothetical protein
no
0.51
8
GFF6732
High-affinity branched-chain amino acid transport system permease protein LivH (TC 3.A.1.4.1)
no
0.50
9
GFF2948
salicylate esterase
no
0.50
10
GFF5589
Methionine aminopeptidase (EC 3.4.11.18)
no
0.49
11
GFF5239
hypothetical protein
no
0.49
12
GFF3402
no description
no
0.48
13
GFF1975
hypothetical protein
no
0.48
14
GFF6081
Peptidase S1 and S6, chymotrypsin/Hap
no
0.48
15
GFF1744
Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3)
no
0.48
16
GFF1963
Transcriptional regulator, AsnC family
no
0.47
17
GFF3502
hypothetical protein
no
0.47
18
GFF881
Transcriptional regulator ligR, LysR family
0.34
0.47
19
GFF6347
AAA+ ATPase superfamily protein YifB/ComM, associated with DNA recombination
no
0.47
20
GFF2161
Dihydroorotase (EC 3.5.2.3)
no
0.47
Or look for
negative cofitness