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  • Top cofit genes for GFF2554 from Variovorax sp. SCN45

    Integral membrane protein
    SEED: Integral membrane protein

    Rank Hit Name Description Conserved? Cofitness  
    1 GFF1755 diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s) no 0.65
    2 GFF3525 Protein tyrosine/serine phosphatase no 0.60
    3 GFF1086 putative Glutathione-regulated potassium-efflux system protein KefB no 0.58
    4 GFF5272 Various polyols ABC transporter, substrate-binding protein no 0.58
    5 GFF6861 no description no 0.57
    6 GFF3426 Predicted kinase no 0.56
    7 GFF3518 no description no 0.56
    8 GFF3071 ADP-ribose pyrophosphatase of COG1058 family (EC 3.6.1.13) no 0.54
    9 GFF2275 3-methylmercaptopropionyl-CoA dehydrogenase (DmdC) no 0.54
    10 GFF7311 Putative transmembrane lipoprotein no 0.51
    11 GFF6300 CaiB/BaiF family protein no 0.49
    12 GFF1911 ABC transporter, substrate-binding protein (cluster 11, riboflavin/purine nucleoside/unknown) no 0.49
    13 GFF6592 hypothetical protein no 0.48
    14 GFF4164 Thymidine phosphorylase (EC 2.4.2.4) no 0.48
    15 GFF4551 Putative preQ0 transporter YhhQ no 0.48
    16 GFF6579 Conjugative transfer protein TrbB no 0.48
    17 GFF5092 2-hydroxyhepta-2,4-diene-1,7-dioate isomerase (EC 5.3.3.-) no 0.47
    18 GFF1385 Multidrug resistance transporter, Bcr/CflA family no 0.47
    19 GFF1961 Prephenate dehydratase (EC 4.2.1.51) @ Arogenate dehydratase (EC 4.2.1.91) no 0.47
    20 GFF784 KEGG: RNA polymerase sigma-70 factor, ECF subfamily no 0.47

    Or look for negative cofitness