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  • Top cofit genes for PS417_13005 from Pseudomonas simiae WCS417

    Asp/Glu racemase
    SEED: Maleate cis-trans isomerase (EC 5.2.1.1)
    KEGG: maleate isomerase

    Rank Hit Name Description Conserved? Cofitness  
    1 PS417_24305 DNA repair protein RadA 0.33 0.23
    2 PS417_12145 acetoacetyl-CoA synthetase no 0.22
    3 PS417_04755 membrane protein no 0.20
    4 PS417_11960 Valyl-tRNA synthetase no 0.20
    5 PS417_26265 hypothetical protein no 0.19
    6 PS417_11190 oxidoreductase no 0.18
    7 PS417_06935 hydroxymethylglutaryl-CoA lyase 0.20 0.18
    8 PS417_28250 cell wall assembly protein no 0.18
    9 PS417_19990 hypothetical protein no 0.18
    10 PS417_07530 multidrug transporter no 0.18
    11 PS417_18360 hypothetical protein no 0.18
    12 PS417_15910 lysine transporter LysE no 0.17
    13 PS417_21925 short-chain dehydrogenase no 0.17
    14 PS417_09795 lipase 0.37 0.17
    15 PS417_23355 4-aminobutyrate aminotransferase no 0.17
    16 PS417_11110 xylose isomerase no 0.17
    17 PS417_23815 pseudouridine synthase no 0.17
    18 PS417_11630 sodium:dicarboxylate symporter no 0.17
    19 PS417_15690 ribonucleoside-triphosphate reductase 0.24 0.17
    20 PS417_24780 peptidase C13 0.14 0.16

    Or look for negative cofitness