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  • Top cofit genes for PS417_12985 from Pseudomonas simiae WCS417

    DNA-binding protein
    SEED: Transcriptional regulator, GntR family domain / Aspartate aminotransferase (EC 2.6.1.1)
    KEGG: GntR family transcriptional regulator / MocR family aminotransferase

    Rank Hit Name Description Conserved? Cofitness  
    1 PS417_18205 aldehyde dehydrogenase no 0.22
    2 PS417_20635 ABC transporter ATP-binding protein no 0.22
    3 PS417_03310 carbonate dehydratase 0.50 0.21
    4 PS417_16990 acyl-CoA dehydrogenase no 0.21
    5 PS417_17705 LacI family transcriptional regulator no 0.20
    6 PS417_20380 hypothetical protein no 0.20
    7 PS417_06625 hypothetical protein no 0.20
    8 PS417_16005 ATPase no 0.20
    9 PS417_25120 capsular biosynthesis protein no 0.20
    10 PS417_23580 peptidylprolyl isomerase no 0.19
    11 PS417_15535 oxidoreductase no 0.19
    12 PS417_15940 mechanosensitive ion channel protein MscS no 0.19
    13 PS417_04435 uracil phosphoribosyltransferase 0.50 0.19
    14 PS417_06785 NADH:flavin oxidoreductase no 0.18
    15 PS417_12335 cobalt transporter no 0.18
    16 PS417_08990 ABC transporter substrate-binding protein no 0.18
    17 PS417_03230 TetR family transcriptional regulator no 0.18
    18 PS417_26715 peptidase P60 0.20 0.18
    19 PS417_12135 peptidylprolyl isomerase 0.34 0.18
    20 PS417_19155 DSBA oxidoreductase no 0.18

    Or look for negative cofitness