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  • Top cofit genes for GFF2547 from Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868

    Aspartate aminotransferase (EC 2.6.1.1)
    SEED: Aspartate aminotransferase (EC 2.6.1.1)
    KEGG: cystathione beta-lyase

    Rank Hit Name Description Conserved? Cofitness  
    1 GFF1032 DNA polymerase III psi subunit (EC 2.7.7.7) no 0.64
    2 GFF3702 hypothetical protein no 0.59
    3 GFF684 Putative membrane protein no 0.57
    4 GFF762 Putative inner membrane protein no 0.57
    5 GFF824 tRNA dimethylallyltransferase (EC 2.5.1.75) 0.25 0.55
    6 GFF3862 Deoxycytidine triphosphate deaminase (EC 3.5.4.13) no 0.55
    7 GFF1790 FIG00634494: possible peptidase no 0.54
    8 GFF1553 FIG01046564: hypothetical protein no 0.54
    9 GFF2475 Ribonuclease III (EC 3.1.26.3) no 0.53
    10 GFF2627 putative amino acid ABC transporter no 0.53
    11 GFF2737 YciL protein no 0.53
    12 GFF3192 DedA family inner membrane protein YqjA no 0.51
    13 GFF1303 Exodeoxyribonuclease V gamma chain (EC 3.1.11.5) no 0.51
    14 GFF3550 Putative transport system permease protein no 0.50
    15 GFF1081 UPF0246 protein YaaA no 0.50
    16 GFF342 FIG01046502: hypothetical protein no 0.50
    17 GFF2497 3-hydroxypropionate dehydrogenase (EC 1.1.1.298) 0.22 0.50
    18 GFF3471 Putative two-component response regulator and GGDEF family protein YeaJ no 0.49
    19 GFF4887 Transcriptional regulator, LysR family no 0.49
    20 GFF4859 L-fucose isomerase (EC 5.3.1.25) no 0.48

    Or look for negative cofitness