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  • Top cofit genes for GFF2541 from Variovorax sp. SCN45

    FIG00899427: hypothetical protein
    SEED: COG3536: Uncharacterized protein conserved in bacteria

    Rank Hit Name Description Conserved? Cofitness  
    1 GFF6834 no description no 0.69
    2 GFF2786 Sulfate transporter family protein 0.28 0.56
    3 GFF5527 Asl0046 protein no 0.55
    4 GFF5440 RNA polymerase ECF-type sigma factor no 0.54
    5 GFF7281 no description no 0.54
    6 GFF1998 Two-component system sensor histidine kinase no 0.54
    7 GFF1948 Phage integrase no 0.54
    8 GFF4036 hypothetical protein no 0.53
    9 GFF6798 ABC transporter, permease protein (cluster 3, basic aa/glutamine/opines) 0.28 0.53
    10 GFF5352 Split AAA-ATPase protein PA0787 no 0.53
    11 GFF2394 MotA/TolQ/ExbB proton channel family protein no 0.53
    12 GFF5276 D-arabinitol 4-dehydrogenase (EC 1.1.1.11) 0.41 0.53
    13 GFF7351 1,2-phenylacetyl-CoA epoxidase, subunit E (EC 1.14.13.149) no 0.51
    14 GFF4727 Two-component transcriptional response regulator, LuxR family no 0.50
    15 GFF2759 hypothetical protein no 0.50
    16 GFF1499 BUG/TctC family periplasmic protein no 0.50
    17 GFF4038 Cobalt/zinc/cadmium efflux RND transporter, membrane fusion protein, CzcB family no 0.50
    18 GFF3229 hypothetical protein no 0.50
    19 GFF4347 High-affinity branched-chain amino acid transport system permease protein LivH (TC 3.A.1.4.1) no 0.49
    20 GFF6509 hypothetical protein no 0.49

    Or look for negative cofitness