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  • Top cofit genes for PS417_12940 from Pseudomonas simiae WCS417

    sugar ABC transporter substrate-binding protein
    SEED: Iron siderophore sensor protein

    Rank Hit Name Description Conserved? Cofitness  
    1 PS417_11245 RNA polymerase subunit sigma-24 no 0.23
    2 PS417_05465 alpha/beta hydrolase 0.35 0.21
    3 PS417_17375 C4-dicarboxylate ABC transporter no 0.19
    4 PS417_10250 integrase no 0.18
    5 PS417_23880 glutamyl-Q tRNA(Asp) ligase no 0.18
    6 PS417_17305 hypothetical protein no 0.18
    7 PS417_27135 glutamine synthetase no 0.18
    8 PS417_03405 D-alanyl-alanine synthetase no 0.18
    9 PS417_03945 chemotaxis protein no 0.17
    10 PS417_27050 ABC transporter substrate-binding protein no 0.17
    11 PS417_08930 hypothetical protein no 0.17
    12 PS417_02865 peptidase no 0.17
    13 PS417_15010 TetR family transcriptional regulator no 0.17
    14 PS417_12945 sulfonate ABC transporter ATP-binding protein no 0.17
    15 PS417_24650 membrane protein 0.34 0.16
    16 PS417_11345 membrane protein no 0.16
    17 PS417_19355 glutaredoxin no 0.16
    18 PS417_03780 general secretion pathway protein GspH no 0.16
    19 PS417_13190 transporter no 0.16
    20 PS417_13470 peptidase 0.58 0.16

    Or look for negative cofitness