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  • Top cofit genes for PS417_12935 from Pseudomonas simiae WCS417

    RNA polymerase sigma factor
    SEED: RNA polymerase sigma-70 factor, ECF subfamily
    KEGG: RNA polymerase sigma-70 factor, ECF subfamily

    Rank Hit Name Description Conserved? Cofitness  
    1 PS417_14945 beta-lactamase no 0.27
    2 PS417_18710 hypothetical protein no 0.24
    3 PS417_22535 ornithine acetyltransferase no 0.23
    4 PS417_15755 protease no 0.23
    5 PS417_07315 LysR family transcriptional regulator no 0.23
    6 PS417_03005 arginine decarboxylase no 0.23
    7 PS417_12280 MerR family transcriptional regulator no 0.22
    8 PS417_20930 50S rRNA methyltransferase no 0.22
    9 PS417_07970 hypothetical protein no 0.21
    10 PS417_14960 ATPase no 0.21
    11 PS417_05545 amino acid ABC transporter ATP-binding protein 0.19 0.21
    12 PS417_12765 oxidoreductase 0.23 0.20
    13 PS417_02960 ribosomal protein L11 methyltransferase no 0.20
    14 PS417_26760 oxidase no 0.19
    15 PS417_02145 potassium transporter KefA no 0.19
    16 PS417_27320 hemolysin secretion protein D no 0.19
    17 PS417_14965 transcriptional regulator no 0.19
    18 PS417_16790 ABC transporter permease no 0.19
    19 PS417_09450 Fis family transcriptional regulator 0.27 0.19
    20 PS417_03290 hypothetical protein no 0.19

    Or look for negative cofitness