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  • Top cofit genes for PS417_12925 from Pseudomonas simiae WCS417

    serine dehydratase
    SEED: Threonine dehydratase, catabolic (EC 4.3.1.19)
    KEGG: threonine dehydratase

    Rank Hit Name Description Conserved? Cofitness  
    1 PS417_17650 proteinase no 0.23
    2 PS417_01440 hypothetical protein no 0.21
    3 PS417_06700 3-oxoadipate CoA-transferase subunit A (EC 2.8.3.6) (from data) no 0.21
    4 PS417_09670 AraC family transcriptional regulator no 0.21
    5 PS417_02465 carbohydrate kinase no 0.20
    6 PS417_11465 LysR family transcriptional regulator no 0.20
    7 PS417_17820 hypothetical protein no 0.20
    8 PS417_03490 type III secretion system protein SsaR no 0.20
    9 PS417_15730 major facilitator transporter no 0.20
    10 PS417_03390 AraC family transcriptional regulator no 0.20
    11 PS417_18280 transporter no 0.19
    12 PS417_06815 beta-lactamase no 0.19
    13 PS417_17210 MFS transporter no 0.19
    14 PS417_14940 LysR family transcriptional regulator no 0.19
    15 PS417_25370 hypothetical protein no 0.19
    16 PS417_06750 hemolysin no 0.18
    17 PS417_19960 membrane protein 0.30 0.18
    18 PS417_17185 pyruvate dehydrogenase no 0.18
    19 PS417_24860 hypothetical protein no 0.18
    20 PS417_20490 hypothetical protein no 0.18

    Or look for negative cofitness