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  • Top cofit genes for GFF2535 from Variovorax sp. SCN45

    Glycerol-3-phosphate ABC transporter, permease protein UgpE (TC 3.A.1.1.3)
    SEED: Glycerol-3-phosphate ABC transporter, permease protein UgpE (TC 3.A.1.1.3)
    KEGG: sn-glycerol 3-phosphate transport system permease protein

    Rank Hit Name Description Conserved? Cofitness  
    1 GFF5215 Efflux ABC transporter, permease/ATP-binding protein 0.54 0.56
    2 GFF2622 Putative transport protein no 0.54
    3 GFF2839 Protein GlcG no 0.52
    4 GFF6115 ABC transporter, substrate-binding protein (cluster 5, nickel/peptides/opines) no 0.52
    5 GFF5926 FIG00957260: hypothetical protein no 0.52
    6 GFF6736 Sulfate transporter/antisigma-factor antagonist STAS:Sulphate transporter no 0.50
    7 GFF7160 hypothetical protein no 0.50
    8 GFF695 Cytochrome B561 no 0.50
    9 GFF2776 hypothetical protein no 0.49
    10 GFF6203 UDP-glucose 4-epimerase (EC 5.1.3.2) no 0.49
    11 GFF1839 Integral membrane protein no 0.49
    12 GFF815 COGs COG3777 no 0.49
    13 GFF7247 no description no 0.49
    14 GFF2630 Ligand-binding SRPBCC domain protein family no 0.48
    15 GFF5168 cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases no 0.48
    16 GFF3006 hypothetical protein no 0.48
    17 GFF4704 Oxidoreductase, short-chain dehydrogenase/reductase family (EC 1.1.1.-) no 0.48
    18 GFF3760 putative lipoprotein no 0.48
    19 GFF5550 DNA protection during starvation protein 0.33 0.48
    20 GFF622 BUG/TctC family periplasmic protein no 0.47

    Or look for negative cofitness