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  • Top cofit genes for GFF2530 from Variovorax sp. SCN45

    ABC transporter, substrate-binding protein PA3836
    SEED: ABC transporter substrate-binding protein
    KEGG: putative ABC transport system substrate-binding protein

    Rank Hit Name Description Conserved? Cofitness  
    1 GFF6798 ABC transporter, permease protein (cluster 3, basic aa/glutamine/opines) no 0.58
    2 GFF4435 hypothetical protein no 0.56
    3 GFF5538 ATP-dependent DNA helicase RecG (EC 3.6.4.12) 0.19 0.54
    4 GFF2144 tRNA-dihydrouridine synthase DusB no 0.51
    5 GFF5675 Cytochrome O ubiquinol oxidase subunit IV (EC 1.10.3.-) no 0.51
    6 GFF2788 FIG003461: hypothetical protein no 0.51
    7 GFF110 pyridoxal-phosphate dependent enzyme family protein no 0.51
    8 GFF5084 FIG00933367: hypothetical protein no 0.51
    9 GFF7390 Aldehyde dehydrogenase (EC 1.2.1.3) no 0.50
    10 GFF3579 probable iron-sulfur binding protein YPO1417 no 0.50
    11 GFF6444 no description no 0.50
    12 GFF6834 no description no 0.50
    13 GFF5338 Phospholipid ABC transporter shuttle protein MlaC no 0.50
    14 GFF1205 Oxidoreductase probably involved in sulfite reduction no 0.50
    15 GFF842 hypothetical protein no 0.50
    16 GFF2546 sodium-solute symporter, putative no 0.49
    17 GFF203 hypothetical protein no 0.49
    18 GFF2028 Uncharacterized MFS-type transporter no 0.48
    19 GFF7016 FAD-dependent oxidoreductase no 0.48
    20 GFF363 Transcriptional regulator, Crp/Fnr family no 0.48

    Or look for negative cofitness