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  • Top cofit genes for PS417_12895 from Pseudomonas simiae WCS417

    pyruvate dehydrogenase
    SEED: Pyruvate dehydrogenase E1 component (EC 1.2.4.1)
    KEGG: pyruvate dehydrogenase E1 component

    Rank Hit Name Description Conserved? Cofitness  
    1 PS417_01505 gamma-aminobutyrate transporter no 0.60
    2 PS417_23700 aromatic amino acid transporter no 0.43
    3 PS417_28135 sodium:alanine symporter no 0.41
    4 PS417_26985 phosphoenolpyruvate-protein phosphotransferase no 0.35
    5 PS417_22235 aromatic amino acid transporter no 0.33
    6 PS417_06615 ABC transporter for branched-chain amino acids, substrate-binding component (from data) 0.50 0.31
    7 PS417_26125 glutathione S-transferase no 0.28
    8 PS417_02150 potassium/proton antiporter 0.20 0.27
    9 PS417_26205 threonine aldolase no 0.25
    10 PS417_01805 amino acid ABC transporter substrate-binding protein no 0.24
    11 PS417_24440 TetR family transcriptional regulator 0.30 0.24
    12 PS417_08920 branched-chain amino acid ABC transporter substrate-binding protein 0.43 0.24
    13 PS417_16500 arginyl-tRNA-protein transferase no 0.24
    14 PS417_01485 ABC transporter permease no 0.23
    15 PS417_25910 amine oxidase no 0.22
    16 PS417_06605 leucine/isoleucine/valine transporter permease subunit 0.42 0.22
    17 PS417_19180 sugar-binding protein no 0.21
    18 PS417_17995 hypothetical protein no 0.21
    19 PS417_27245 aminotransferase DegT no 0.21
    20 PS417_12095 ABC transporter substrate-binding protein no 0.21

    Or look for negative cofitness