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  • Top cofit genes for GFF2529 from Variovorax sp. SCN45

    ABC transporter, permease protein PA3837
    SEED: ABC transporter permease protein
    KEGG: putative ABC transport system permease protein

    Rank Hit Name Description Conserved? Cofitness  
    1 GFF5299 TonB-dependent receptor no 0.63
    2 GFF2316 FIG015547: peptidase, M16 family 0.32 0.59
    3 GFF10 Cobalt/zinc/cadmium efflux RND transporter, membrane fusion protein, CzcB family no 0.56
    4 GFF543 Uncharacterized deacetylase PA5390 no 0.56
    5 GFF5105 Transcriptional regulator, MerR family no 0.55
    6 GFF1926 ABC transporter, substrate-binding protein (cluster 10, nitrate/sulfonate/bicarbonate) no 0.54
    7 GFF2163 hypothetical protein no 0.54
    8 GFF3608 ABC transporter, permease protein 2 (cluster 4, leucine/isoleucine/valine/benzoate) no 0.53
    9 GFF6217 hypothetical protein no 0.51
    10 GFF3914 Ferrous iron transport peroxidase EfeB no 0.50
    11 GFF5998 Uncharacterized protein YiiX no 0.49
    12 GFF1977 L-asparaginase (EC 3.5.1.1) no 0.49
    13 GFF5818 Two-component transcriptional response regulator, NarL/FixJ family no 0.48
    14 GFF4705 Monooxygenase, flavin-binding family no 0.48
    15 GFF1464 hypothetical protein no 0.48
    16 GFF4106 ABC transporter, ATP-binding protein (cluster 3, basic aa/glutamine/opines) no 0.48
    17 GFF3833 FIG01056426: hypothetical protein no 0.48
    18 GFF535 Transcriptional regulator, AraC family no 0.47
    19 GFF6455 Bll3817 protein 0.44 0.47
    20 GFF427 no description no 0.47

    Or look for negative cofitness