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  • Top cofit genes for PS417_12890 from Pseudomonas simiae WCS417

    methyltransferase
    SEED: Methyltransferase (EC 2.1.1.-)
    KEGG: ribosomal RNA large subunit methyltransferase I

    Rank Hit Name Description Conserved? Cofitness  
    1 PS417_02485 tRNA delta(2)-isopentenylpyrophosphate transferase 0.25 0.32
    2 PS417_05925 spermidine/putrescine ABC transporter permease 0.45 0.29
    3 PS417_16995 LysR family transcriptional regulator no 0.28
    4 PS417_22480 ferritin no 0.25
    5 PS417_15580 DNA polymerase 0.27 0.25
    6 PS417_17525 pyridine nucleotide-disulfide oxidoreductase 0.44 0.24
    7 PS417_03190 antibiotic biosynthesis monooxygenase 0.52 0.23
    8 PS417_15450 ABC transporter permease no 0.23
    9 PS417_14965 transcriptional regulator no 0.23
    10 PS417_05940 spermidine/putrescine ABC transporter substrate-binding protein no 0.22
    11 PS417_27245 aminotransferase DegT 0.42 0.22
    12 PS417_26485 sodium:proton antiporter no 0.22
    13 PS417_20790 adenine phosphoribosyltransferase 0.50 0.21
    14 PS417_18355 DNA-binding protein no 0.21
    15 PS417_21575 chemotaxis protein 0.44 0.21
    16 PS417_17820 hypothetical protein no 0.21
    17 PS417_19785 flagellar biogenesis protein no 0.21
    18 PS417_06370 cold-shock protein no 0.20
    19 PS417_08090 3-oxoacyl-ACP reductase 0.42 0.20
    20 PS417_20375 hypothetical protein no 0.20

    Or look for negative cofitness