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  • Top cofit genes for GFF2528 from Variovorax sp. SCN45

    ABC transporter, ATP-binding protein PA3838
    SEED: ABC transporter ATP-binding protein
    KEGG: putative ABC transport system ATP-binding protein

    Rank Hit Name Description Conserved? Cofitness  
    1 GFF5664 hypothetical protein no 0.57
    2 GFF3410 Transcriptional regulator, AraC family no 0.53
    3 GFF840 no description no 0.52
    4 GFF1828 phosphodiesterase I no 0.49
    5 GFF6938 Efflux transport system, outer membrane factor (OMF) lipoprotein no 0.49
    6 GFF491 no description no 0.49
    7 GFF7378 protein of unknown function DUF1311 no 0.48
    8 GFF1714 no description no 0.48
    9 GFF25 Alcohol dehydrogenase (EC 1.1.1.1) no 0.48
    10 GFF357 SOS-response repressor and protease LexA (EC 3.4.21.88) no 0.48
    11 GFF5648 ABC transporter, substrate-binding protein (cluster 12, methionine/phosphonates) no 0.47
    12 GFF2390 no description no 0.47
    13 GFF240 Cytosol aminopeptidase PepA (EC 3.4.11.1) no 0.47
    14 GFF1676 ABC transporter, permease protein 1 (cluster 4, leucine/isoleucine/valine/benzoate) no 0.47
    15 GFF3619 no description no 0.47
    16 GFF4966 no description no 0.46
    17 GFF434 OsmC/Ohr family protein no 0.46
    18 GFF3616 2-hydroxychromene-2-carboxylate isomerase family protein no 0.46
    19 GFF5850 Aldehyde dehydrogenase (EC 1.2.1.3); Probable coniferyl aldehyde dehydrogenase (EC 1.2.1.68) no 0.46
    20 GFF3932 Acetyltransferase, GNAT family no 0.46

    Or look for negative cofitness