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  • Top cofit genes for PS417_12845 from Pseudomonas simiae WCS417

    NAD(P)H dehydrogenase
    SEED: NAD(P)H oxidoreductase YRKL (EC 1.6.99.-) @ Putative NADPH-quinone reductase (modulator of drug activity B) @ Flavodoxin 2
    KEGG: NAD(P)H dehydrogenase (quinone)

    Rank Hit Name Description Conserved? Cofitness  
    1 PS417_21850 LysR family transcriptional regulator no 0.26
    2 PS417_18495 hypothetical protein 0.23 0.23
    3 PS417_03215 8-oxoguanine deaminase no 0.22
    4 PS417_14475 2-hydroxyacid dehydrogenase no 0.22
    5 PS417_02695 protein hupE 0.33 0.21
    6 PS417_06715 protocatechuate 3,4-dioxygenase no 0.20
    7 PS417_19920 AraC family transcriptional regulator 0.29 0.19
    8 PS417_18710 hypothetical protein 0.27 0.18
    9 PS417_20930 50S rRNA methyltransferase 0.30 0.18
    10 PS417_10360 MFS transporter no 0.18
    11 PS417_15830 GNAT family acetyltransferase no 0.18
    12 PS417_03015 hypothetical protein no 0.17
    13 PS417_08735 hypothetical protein no 0.17
    14 PS417_16785 ABC transporter permease 0.37 0.17
    15 PS417_23620 epimerase no 0.17
    16 PS417_20225 GntR family transcriptional regulator no 0.17
    17 PS417_01900 poly(3-hydroxyalkanoate) depolymerase 0.35 0.17
    18 PS417_06985 metal ABC transporter ATPase no 0.17
    19 PS417_11545 spermidine/putrescine ABC transporter substrate-binding protein no 0.17
    20 PS417_08620 hypothetical protein no 0.17

    Or look for negative cofitness