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  • Top cofit genes for PS417_12830 from Pseudomonas simiae WCS417

    LysR family transcriptional regulator
    SEED: Transcriptional regulator, LysR family

    Rank Hit Name Description Conserved? Cofitness  
    1 PS417_12635 alkanesulfonate monooxygenase no 0.23
    2 PS417_09930 hypothetical protein no 0.22
    3 PS417_04700 RND transporter MFP subunit no 0.20
    4 PS417_16010 alkanesulfonate monooxygenase no 0.20
    5 PS417_10970 effector protein no 0.20
    6 PS417_22160 3-beta hydroxysteroid dehydrogenase 0.55 0.20
    7 PS417_13550 amino acid ABC transporter substrate-binding protein no 0.20
    8 PS417_09340 spermidine/putrescine ABC transporter ATP-binding protein no 0.20
    9 PS417_09050 transcriptional regulator no 0.19
    10 PS417_07175 beta-lactamase no 0.19
    11 PS417_21700 arginine N-succinyltransferase no 0.19
    12 PS417_12090 hypothetical protein no 0.19
    13 PS417_25045 hypothetical protein no 0.18
    14 PS417_14080 hypothetical protein no 0.18
    15 PS417_22230 class I peptide chain release factor 0.32 0.18
    16 PS417_23615 sulfate transporter no 0.18
    17 PS417_00770 autotransporter no 0.18
    18 PS417_26100 amino acid ABC transporter no 0.18
    19 PS417_08860 small component of pyruvate transporter (yjcH-like) (from data) no 0.17
    20 PS417_09565 DNA polymerase II 0.22 0.17

    Or look for negative cofitness