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  • Top cofit genes for PS417_12800 from Pseudomonas simiae WCS417

    alpha-amylase
    SEED: Trehalose synthase (EC 5.4.99.16)
    KEGG: maltose alpha-D-glucosyltransferase

    Rank Hit Name Description Conserved? Cofitness  
    1 PS417_19635 lipid kinase no 0.32
    2 PS417_03930 thymidine phosphorylase 0.19 0.31
    3 PS417_06135 glycerol-3-phosphate acyltransferase 0.36 0.30
    4 PS417_20585 chemotaxis protein no 0.30
    5 PS417_00625 taurine dioxygenase no 0.30
    6 PS417_00630 nitrate ABC transporter substrate-binding protein 0.35 0.29
    7 PS417_00635 sulfonate ABC transporter ATP-binding protein 0.34 0.28
    8 PS417_04890 ATP-dependent RNA helicase RhlB no 0.26
    9 PS417_17010 AMP-binding protein 0.36 0.25
    10 PS417_12805 glycogen branching protein 0.56 0.25
    11 PS417_18720 endonuclease no 0.25
    12 PS417_01015 polar amino acid ABC transporter permease no 0.24
    13 PS417_24275 diguanylate phosphodiesterase no 0.24
    14 PS417_19625 histidine kinase 0.36 0.23
    15 PS417_20975 protein kinase 0.41 0.23
    16 PS417_07095 histidine kinase no 0.23
    17 PS417_17190 MarR family transcriptional regulator no 0.22
    18 PS417_07755 hypothetical protein no 0.22
    19 PS417_15650 glutamine amidotransferase no 0.22
    20 PS417_19630 LuxR family transcriptional regulator 0.30 0.22

    Or look for negative cofitness