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  • Top cofit genes for GFF2506 from Variovorax sp. SCN45

    Probable poly(beta-D-mannuronate) O-acetylase (EC 2.3.1.-)
    SEED: Probable poly(beta-D-mannuronate) O-acetylase (EC 2.3.1.-)

    Rank Hit Name Description Conserved? Cofitness  
    1 GFF531 hypothetical protein no 0.95
    2 GFF2505 hypothetical protein no 0.92
    3 GFF2354 FIG00555615: hypothetical protein no 0.82
    4 GFF2152 twitching motility protein PilH no 0.79
    5 GFF5429 Iron(III) dicitrate transport protein FecA no 0.78
    6 GFF375 hypothetical protein 0.53 0.75
    7 GFF5408 Protein serine/threonine phosphatase PrpC, regulation of stationary phase 0.62 0.73
    8 GFF6392 hypothetical protein no 0.68
    9 GFF1119 Ribonuclease HI (EC 3.1.26.4) no 0.67
    10 GFF5521 Ribosomal-protein-S18p-alanine acetyltransferase (EC 2.3.1.128) no 0.66
    11 GFF1116 Membrane-bound lytic murein transglycosylase D no 0.65
    12 GFF6873 Aminotransferase, DegT/DnrJ/EryC1/StrS family no 0.64
    13 GFF6532 Phosphoglucomutase (EC 5.4.2.2) @ Phosphomannomutase (EC 5.4.2.8) 0.46 0.64
    14 GFF5002 ABC-type branched-chain amino acid transport systems, periplasmic component no 0.63
    15 GFF2501 O-antigen acetylase no 0.61
    16 GFF4801 DedA protein no 0.61
    17 GFF240 Cytosol aminopeptidase PepA (EC 3.4.11.1) no 0.61
    18 GFF5817 Two-component system sensor histidine kinase no 0.60
    19 GFF971 NLP/P60 protein no 0.60
    20 GFF3258 hypothetical protein no 0.59

    Or look for negative cofitness