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Cofit
Protein
Homologs
Top cofit genes for GFF2501 from
Variovorax sp. SCN45
O-antigen acetylase
SEED: O-antigen acetylase
Rank
Hit
Name
Description
Conserved?
Cofitness
1
GFF2152
twitching motility protein PilH
no
0.66
2
GFF531
hypothetical protein
no
0.62
3
GFF1726
Filamentous haemagglutinin family outer membrane protein associated with VreARI signalling system
no
0.61
4
GFF2506
Probable poly(beta-D-mannuronate) O-acetylase (EC 2.3.1.-)
no
0.61
5
GFF2782
3-oxoacyl-[acyl-carrier-protein] synthase, KASII (EC 2.3.1.179)
no
0.59
6
GFF3917
Ferrous iron transporter FeoB
no
0.59
7
GFF6288
L-lysine permease
no
0.58
8
GFF2505
hypothetical protein
no
0.58
9
GFF4734
Nitrite reductase [NAD(P)H] large subunit (EC 1.7.1.4)
no
0.53
10
GFF2354
FIG00555615: hypothetical protein
no
0.53
11
GFF975
4-hydroxyphenylacetate 3-monooxygenase (EC 1.14.14.9)
no
0.53
12
GFF375
hypothetical protein
no
0.52
13
GFF5336
Phospholipid ABC transporter substrate-binding protein MlaD
no
0.52
14
GFF971
NLP/P60 protein
no
0.52
15
GFF5521
Ribosomal-protein-S18p-alanine acetyltransferase (EC 2.3.1.128)
no
0.51
16
GFF4633
no description
no
0.51
17
GFF3258
hypothetical protein
no
0.51
18
GFF5288
Uncharacterized protein PA4513
no
0.51
19
GFF551
Uncharacterized protein Tbd_1903
no
0.51
20
GFF3893
hypothetical protein
no
0.50
Or look for
negative cofitness