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  • Top cofit genes for GFF250 from Variovorax sp. SCN45

    Homoserine/homoserine lactone efflux protein
    SEED: Homoserine/homoserine lactone efflux protein

    Rank Hit Name Description Conserved? Cofitness  
    1 GFF2649 putative autotransporter protein no 0.57
    2 GFF2817 Probable proline-rich protein no 0.56
    3 GFF1504 Alkylhydroperoxidase AhpD domain protein no 0.56
    4 GFF557 Plectin 1 no 0.54
    5 GFF4417 Conjugative transfer protein TrbE no 0.53
    6 GFF5856 Outer membrane receptor proteins, likely involved in siderophore uptake no 0.53
    7 GFF3906 Acyl-CoA dehydrogenase no 0.52
    8 GFF1303 Glutamate/aspartate ABC transporter, substrate-binding protein GltI (TC 3.A.1.3.4) no 0.52
    9 GFF2516 hypothetical protein no 0.52
    10 GFF6792 Glycerophosphoryl diester phosphodiesterase (EC 3.1.4.46) no 0.51
    11 GFF4393 Uncharacterized ABC1 family protein XCC_1720 no 0.50
    12 GFF312 FIG021862: membrane protein, exporter no 0.50
    13 GFF6333 1,4-alpha-glucan (glycogen) branching enzyme, GH-13-type (EC 2.4.1.18) no 0.50
    14 GFF6488 no description no 0.50
    15 GFF6269 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases no 0.50
    16 GFF3807 FIG00538552: hypothetical protein no 0.49
    17 GFF3576 no description no 0.49
    18 GFF4983 fumarate reductase/succinate dehydrogenase flavoprotein-like no 0.49
    19 GFF4181 hypothetical protein no 0.49
    20 GFF5295 Ferrichrome-iron receptor no 0.49

    Or look for negative cofitness