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  • Top cofit genes for GFF2490 from Variovorax sp. SCN45

    Transcriptional regulator, LysR family
    SEED: Transcriptional activator protein LysR

    Rank Hit Name Description Conserved? Cofitness  
    1 GFF635 Urea ABC transporter, permease protein UrtB no 0.57
    2 GFF2799 Molybdopterin-guanine dinucleotide biosynthesis protein MobB no 0.53
    3 GFF2963 Efflux transport system, outer membrane factor (OMF) lipoprotein no 0.53
    4 GFF3409 Probable lipoprotein signal peptide no 0.51
    5 GFF3297 hypothetical protein Ajs_0007 no 0.51
    6 GFF2949 no description no 0.51
    7 GFF5936 T6SS AAA+ chaperone ClpV (TssH) no 0.51
    8 GFF3994 hypothetical protein no 0.50
    9 GFF5813 Heavy metal sensor histidine kinase no 0.49
    10 GFF3577 Transcriptional regulator, LysR family 0.33 0.48
    11 GFF7160 hypothetical protein no 0.47
    12 GFF703 Efflux ABC transporter, permease/ATP-binding protein Atu2242 no 0.47
    13 GFF3433 hypothetical protein no 0.47
    14 GFF4145 transcriptional regulators-like protein no 0.47
    15 GFF2437 hypothetical protein no 0.46
    16 GFF1074 no description no 0.46
    17 GFF3474 Alkyl sulfatase and related hydrolases, MBL-fold metallo-hydrolase superfamily no 0.46
    18 GFF5097 5-carboxymethyl-2-hydroxymuconate delta-isomerase (EC 5.3.3.10) no 0.45
    19 GFF6548 hypothetical protein no 0.45
    20 GFF1932 no description no 0.45

    Or look for negative cofitness