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  • Top cofit genes for GFF2483 from Variovorax sp. SCN45

    Urease alpha subunit (EC 3.5.1.5)
    SEED: Urease alpha subunit (EC 3.5.1.5)
    KEGG: urease subunit alpha

    Rank Hit Name Description Conserved? Cofitness  
    1 GFF566 Type IV fimbrial biogenesis protein PilV no 0.59
    2 GFF4503 RNA polymerase sigma factor 0.43 0.58
    3 GFF3997 Short-chain dehydrogenase/reductase SDR 0.25 0.55
    4 GFF4114 hypothetical protein no 0.53
    5 GFF4142 no description no 0.51
    6 GFF5825 Branched-chain amino acid ABC transporter, ATP-binding protein LivF (TC 3.A.1.4.1) no 0.50
    7 GFF2036 Ornithine cyclodeaminase (EC 4.3.1.12) no 0.50
    8 GFF681 Hypothetical protein in cluster with At3g50560-like gene family no 0.50
    9 GFF40 no description no 0.50
    10 GFF4849 Conjugative transfer protein TrbB no 0.49
    11 GFF6937 Membrane protein no 0.49
    12 GFF4941 Gfa-like protein no 0.48
    13 GFF5822 hypothetical protein no 0.48
    14 GFF6443 no description no 0.47
    15 GFF3469 Glutaminase (EC 3.5.1.2) 0.35 0.47
    16 GFF3710 Lactoylglutathione lyase and related lyases no 0.46
    17 GFF4940 FIG033889: YebC paralog in Betaproteobacteria no 0.46
    18 GFF2550 Dihydroneopterin triphosphate pyrophosphohydrolase type 2 no 0.45
    19 GFF7289 5'-methylthioadenosine nucleosidase (EC 3.2.2.16) @ S-adenosylhomocysteine nucleosidase (EC 3.2.2.9) no 0.45
    20 GFF3987 3-hydroxybutyrate dehydrogenase (EC 1.1.1.30) no 0.45

    Or look for negative cofitness