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  • Top cofit genes for GFF2480 from Variovorax sp. SCN45

    Urease accessory protein UreG
    SEED: Urease accessory protein UreG
    KEGG: urease accessory protein

    Rank Hit Name Description Conserved? Cofitness  
    1 GFF3562 UDP-glucose 6-dehydrogenase (EC 1.1.1.22) no 0.64
    2 GFF215 RNA polymerase sigma-54 factor RpoN no 0.62
    3 GFF3559 no description no 0.61
    4 GFF839 Retron-type RNA-directed DNA polymerase (EC 2.7.7.49) no 0.60
    5 GFF1752 Cysteine dioxygenase (EC 1.13.11.20) no 0.59
    6 GFF6834 no description no 0.58
    7 GFF6008 Citrate synthase (si) (EC 2.3.3.1) no 0.57
    8 GFF4124 no description no 0.55
    9 GFF1542 Anti-sigma B factor RsbT / Phosphoserine phosphatase RsbX (EC 3.1.3.3) no 0.54
    10 GFF6633 hypothetical protein 0.54 0.52
    11 GFF4871 FIG00457034: hypothetical protein no 0.52
    12 GFF1221 KEGG: putative acetyltransferase no 0.52
    13 GFF4299 3-ketoacyl-CoA thiolase no 0.51
    14 GFF4967 Glutathione S-transferase family protein no 0.50
    15 GFF6798 ABC transporter, permease protein (cluster 3, basic aa/glutamine/opines) 0.19 0.50
    16 GFF4584 TRAP-type transport system, periplasmic component, predicted N-acetylneuraminate-binding protein 0.29 0.50
    17 GFF6001 Purine nucleoside permease no 0.49
    18 GFF6722 Glutamate/aspartate ABC transporter, substrate-binding protein GltI (TC 3.A.1.3.4) no 0.49
    19 GFF6821 ribonuclease H no 0.49
    20 GFF1071 no description no 0.49

    Or look for negative cofitness