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  • Top cofit genes for GFF2476 from Variovorax sp. SCN45

    Tripartite tricarboxylate transporter TctB family
    SEED: Tricarboxylate transport protein TctB

    Rank Hit Name Description Conserved? Cofitness  
    1 GFF4581 hypothetical protein no 0.59
    2 GFF4329 Enoyl-CoA hydratase (EC 4.2.1.17) no 0.57
    3 GFF3772 Arginase (EC 3.5.3.1) no 0.56
    4 GFF4583 TRAP-type C4-dicarboxylate transport system, large permease component no 0.55
    5 GFF7258 Transcriptional regulator, IclR family no 0.54
    6 GFF3159 Sulfite dehydrogenase (quinone), molybdopterin-containing subunit SoeA (EC 1.8.5.6) no 0.53
    7 GFF1608 Aminotransferase, class III no 0.51
    8 GFF836 Vitamin B12 ABC transporter, substrate-binding protein BtuF no 0.51
    9 GFF2 Transcription accessory protein (S1 RNA-binding domain) no 0.51
    10 GFF4429 Inner membrane protein YpjD no 0.50
    11 GFF1477 BUG/TctC family periplasmic protein no 0.50
    12 GFF3219 hypothetical protein no 0.50
    13 GFF4824 Transcriptional regulator, AraC family no 0.49
    14 GFF6330 BUG/TctC family periplasmic protein no 0.49
    15 GFF2932 Uncharacterized protein YeaG no 0.49
    16 GFF5328 FIG00537720: hypothetical protein no 0.48
    17 GFF4215 L-amino acid ABC transporter (Glu/Asp/His/...), permease protein 1 AapQ no 0.48
    18 GFF2555 FIG00932538: hypothetical protein no 0.48
    19 GFF374 Transcription elongation factor GreA no 0.48
    20 GFF3974 Oxidoreductase, short-chain dehydrogenase/reductase family no 0.48

    Or look for negative cofitness