Top cofit genes for GFF2474 from Variovorax sp. SCN45

Two-component transcriptional response regulator SMc02366, LuxR family
SEED: response regulator in two-component regulatory system with PhoQ
KEGG: two-component system, OmpR family, response regulator

Rank Hit Name Description Conserved? Cofitness  
1 GFF216 Transmembrane regulator protein PrtR no 0.65
2 GFF3588 ABC transporter, permease protein 2 (cluster 1, maltose/g3p/polyamine/iron) no 0.63
3 GFF438 L-threonine 3-O-phosphate decarboxylase (EC 4.1.1.81) no 0.62
4 GFF2987 CBS domain protein no 0.60
5 GFF3751 Hydroxymethylpyrimidine ABC transporter, transmembrane component no 0.60
6 GFF5440 RNA polymerase ECF-type sigma factor 0.31 0.60
7 GFF2141 GTP-binding and nucleic acid-binding protein YchF 0.55 0.59
8 GFF1203 Sulfate adenylyltransferase subunit 2 (EC 2.7.7.4) 0.64 0.59
9 GFF1164 2-isopropylmalate synthase (EC 2.3.3.13) 0.62 0.59
10 GFF6040 LSU ribosomal protein L33p @ LSU ribosomal protein L33p, zinc-independent no 0.59
11 GFF1202 Sulfate adenylyltransferase subunit 1 (EC 2.7.7.4) 0.63 0.59
12 GFF2825 Alkyl hydroperoxide reductase protein F 0.68 0.59
13 GFF6535 Permease of the drug/metabolite transporter (DMT) superfamily no 0.58
14 GFF7300 Biopolymer transport protein ExbD/TolR no 0.58
15 GFF4821 Transcriptional regulator, AcrR family no 0.58
16 GFF6834 no description no 0.58
17 GFF1204 Phosphoadenylyl-sulfate reductase [thioredoxin] (EC 1.8.4.8) no 0.58
18 GFF5010 Geranyl-CoA carboxylase carboxyl transferase subunit (EC 6.4.1.5) no 0.58
19 GFF5276 D-arabinitol 4-dehydrogenase (EC 1.1.1.11) no 0.57
20 GFF2650 hypothetical protein no 0.57

Or look for negative cofitness