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  • Top cofit genes for GFF247 from Variovorax sp. SCN45

    ATP-dependent helicase HrpA
    SEED: macromolecule metabolism; macromolecule synthesis, modification; dna - replication, repair, restr./modif.

    Rank Hit Name Description Conserved? Cofitness  
    1 GFF1788 hypothetical protein no 0.66
    2 GFF3394 Benzoate ABC transporter, ATP-binding protein 1 no 0.63
    3 GFF2740 4-hydroxy-tetrahydrodipicolinate synthase (EC 4.3.3.7) no 0.63
    4 GFF4227 Thiamine pyrophosphate-requiring enzymes no 0.60
    5 GFF4469 Cell division protein FtsA no 0.59
    6 GFF5549 Hydrogen peroxide-inducible genes activator => OxyR 0.56 0.57
    7 GFF1166 Murein-DD-endopeptidase (EC 3.4.99.-) no 0.57
    8 GFF4880 y4eB gene in pNGR234a homolog no 0.57
    9 GFF3304 Monofunctional biosynthetic peptidoglycan transglycosylase no 0.57
    10 GFF4632 Glycosyl transferase, family 2 no 0.57
    11 GFF3903 Similar to citrate lyase beta chain, 10 no 0.57
    12 GFF478 Rrf2-linked NADH-flavin reductase no 0.57
    13 GFF1332 no description no 0.56
    14 GFF1967 FAD linked oxidase-like no 0.56
    15 GFF4820 BUG/TctC family periplasmic protein no 0.55
    16 GFF1276 Sarcosine oxidase no 0.55
    17 GFF2047 Polyhydroxyalkanoic acid synthase no 0.54
    18 GFF553 Peptidyl-prolyl cis-trans isomerase PpiB (EC 5.2.1.8) 0.68 0.54
    19 GFF6286 Probable signal peptide protein 0.30 0.54
    20 GFF6288 L-lysine permease no 0.54

    Or look for negative cofitness