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  • Top cofit genes for PS417_12595 from Pseudomonas simiae WCS417

    transcriptional regulator
    SEED: Transcriptional regulatory protein RstA
    KEGG: two-component system, OmpR family, response regulator

    Rank Hit Name Description Conserved? Cofitness  
    1 PS417_06775 antibiotic transporter 0.56 0.48
    2 PS417_03625 lipid A 3-O-deacylase 0.24 0.44
    3 PS417_06770 multidrug transporter 0.61 0.43
    4 PS417_07445 peptidase S9 no 0.43
    5 PS417_27605 hypothetical protein 0.38 0.39
    6 PS417_00440 N-acetylmuramoyl-L-alanine amidase no 0.39
    7 PS417_21040 sulfurylase no 0.38
    8 PS417_06365 RNA polymerase sigma factor no 0.38
    9 PS417_07510 aspartyl beta-hydroxylase 0.55 0.36
    10 PS417_24780 peptidase C13 0.49 0.36
    11 PS417_12610 RNA polymerase sigma factor no 0.36
    12 PS417_21050 serine acetyltransferase no 0.34
    13 PS417_19145 membrane protein no 0.34
    14 PS417_00620 GntR family transcriptional regulator no 0.34
    15 PS417_13425 cupin 0.55 0.33
    16 PS417_24605 thiamine-phosphate pyrophosphorylase no 0.33
    17 PS417_21045 cysteine synthase no 0.32
    18 PS417_01165 transcription accessory protein 0.30 0.32
    19 PS417_20955 secretion protein no 0.32
    20 PS417_07140 peptidase M48 0.42 0.31

    Or look for negative cofitness