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  • Top cofit genes for PS417_12555 from Pseudomonas simiae WCS417

    phosphogluconate 2-dehydrogenase KguD (EC 1.1.1.43) (from data)
    Original annotation: bifunctional glyoxylate/hydroxypyruvate reductase B
    SEED: 2-ketogluconate 6-phosphate reductase (EC 1.1.1.43)
    KEGG: phosphogluconate 2-dehydrogenase

    Rank Hit Name Description Conserved? Cofitness  
    1 PS417_22690 phosphogluconate dehydratase 0.92 0.52
    2 PS417_26000 8-amino-7-oxononanoate synthase 0.20 0.47
    3 PS417_26540 adenosylmethionine-8-amino-7-oxononanoate aminotransferase 0.24 0.41
    4 PS417_03310 carbonate dehydratase 0.83 0.38
    5 PS417_26005 biotin synthase 0.31 0.37
    6 PS417_25985 dethiobiotin synthetase 0.21 0.35
    7 PS417_25990 malonyl-CoA O-methyltransferase 0.22 0.32
    8 PS417_02005 glutamate synthase 0.87 0.27
    9 PS417_27435 polyphosphate kinase 0.93 0.27
    10 PS417_08035 adenine transporter (MFS superfamily) (from data) no 0.27
    11 PS417_22620 pyruvate kinase 0.94 0.27
    12 PS417_28220 LysR family transcriptional regulator 0.91 0.27
    13 PS417_02000 glutamate synthase 0.90 0.27
    14 PS417_06645 RNA polymerase-associated protein RapA 0.58 0.27
    15 PS417_05595 ornithine carbamoyltransferase 0.90 0.26
    16 PS417_07165 dihydrodipicolinate synthase no 0.25
    17 PS417_08030 transcriptional regulator 0.45 0.25
    18 PS417_21980 permease DsdX 0.90 0.25
    19 PS417_18440 hypothetical protein no 0.25
    20 PS417_05530 membrane protein no 0.25

    Or look for negative cofitness