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  • Top cofit genes for GFF2443 from Variovorax sp. SCN45

    Iron-sulfur cluster regulator IscR
    SEED: Iron-sulfur cluster regulator IscR

    Rank Hit Name Description Conserved? Cofitness  
    1 GFF647 Two-component system response regulator QseB no 0.55
    2 GFF6446 Xaa-Pro aminopeptidase (EC 3.4.11.9) no 0.55
    3 GFF3112 Methionine ABC transporter substrate-binding protein no 0.53
    4 GFF53 Polyketide synthase modules and related proteins no 0.52
    5 GFF4247 no description no 0.51
    6 GFF7331 FIG00956224: hypothetical protein no 0.51
    7 GFF5775 Glucoamylase (EC 3.2.1.3) no 0.51
    8 GFF6869 no description no 0.49
    9 GFF6320 Putative glutamine amidotransferase YafJ no 0.49
    10 GFF5098 2-oxo-hepta-3-ene-1,7-dioic acid hydratase (EC 4.2.-.-) no 0.48
    11 GFF1238 Two-component transcriptional response regulator, OmpR family no 0.47
    12 GFF200 Ortho-halobenzoate 1,2-dioxygenase alpha-ISP protein OhbB no 0.47
    13 GFF2236 hypothetical protein no 0.47
    14 GFF3739 2-hydroxy-3-oxopropionate reductase (EC 1.1.1.60) no 0.46
    15 GFF3149 RND efflux system, inner membrane transporter no 0.46
    16 GFF144 8-amino-7-oxononanoate synthase (EC 2.3.1.47) no 0.46
    17 GFF1905 hypothetical protein no 0.46
    18 GFF5017 Translation initiation factor SUI1-related protein no 0.45
    19 GFF4347 High-affinity branched-chain amino acid transport system permease protein LivH (TC 3.A.1.4.1) no 0.44
    20 GFF1822 2-ketoglutaric semialdehyde dehydrogenase (EC 1.2.1.26) no 0.44

    Or look for negative cofitness