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  • Top cofit genes for PS417_12455 from Pseudomonas simiae WCS417

    hydrolase
    SEED: HMP-PP hydrolase (pyridoxal phosphatase) Cof, detected in genetic screen for thiamin metabolic genes (PMID:15292217)

    Rank Hit Name Description Conserved? Cofitness  
    1 PS417_11175 AraC family transcriptional regulator 0.71 0.26
    2 PS417_27935 type VI secretion protein no 0.23
    3 PS417_07170 hypothetical protein 0.75 0.21
    4 PS417_08515 hypothetical protein 0.53 0.21
    5 PS417_18545 cell division protein no 0.21
    6 PS417_12215 lytic transglycosylase no 0.20
    7 PS417_04500 hypothetical protein no 0.20
    8 PS417_08185 glycosyl transferase no 0.20
    9 PS417_04730 bifunctional glyoxylate/hydroxypyruvate reductase B no 0.19
    10 PS417_12550 chemotaxis protein 0.27 0.19
    11 PS417_20980 uroporphyrin-III methyltransferase no 0.18
    12 PS417_02210 diguanylate cyclase no 0.18
    13 PS417_10965 chemotaxis protein no 0.18
    14 PS417_19630 LuxR family transcriptional regulator no 0.18
    15 PS417_16790 ABC transporter permease no 0.18
    16 PS417_28275 cobalamin biosynthesis protein CobW no 0.18
    17 PS417_23820 hypothetical protein no 0.18
    18 PS417_21050 serine acetyltransferase 0.70 0.18
    19 PS417_10615 hypothetical protein 0.34 0.18
    20 PS417_17810 microcin B17-processing protein McbB no 0.18

    Or look for negative cofitness