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  • Top cofit genes for PS417_12445 from Pseudomonas simiae WCS417

    6-phosphogluconate dehydrogenase
    SEED: 6-phosphogluconate dehydrogenase, decarboxylating (EC 1.1.1.44)
    KEGG: 6-phosphogluconate dehydrogenase

    Rank Hit Name Description Conserved? Cofitness  
    1 PS417_18605 LysR family transcriptional regulator 0.66 0.28
    2 PS417_26055 cyclic nucleotide-binding protein 0.29 0.27
    3 PS417_25405 catalase no 0.27
    4 PS417_11460 divalent metal cation transporter MntH no 0.26
    5 PS417_24885 transcriptional regulator no 0.25
    6 PS417_03625 lipid A 3-O-deacylase no 0.25
    7 PS417_06365 RNA polymerase sigma factor no 0.25
    8 PS417_02435 flagellar motor protein MotA 0.43 0.25
    9 PS417_28075 phosphate ABC transporter permease no 0.24
    10 PS417_01405 sugar transporter 0.30 0.24
    11 PS417_28085 phosphate-binding protein no 0.24
    12 PS417_15260 protein phosphatase no 0.24
    13 PS417_24495 NAD(FAD)-utilizing dehydrogenase no 0.23
    14 PS417_01420 histidine kinase no 0.23
    15 PS417_01395 biofilm formation protein PelB no 0.23
    16 PS417_12810 diguanylate cyclase no 0.23
    17 PS417_00440 N-acetylmuramoyl-L-alanine amidase 0.31 0.22
    18 PS417_15335 hypothetical protein no 0.22
    19 PS417_01955 peptidase 0.29 0.22
    20 PS417_15265 type VI secretion protein VasK no 0.22

    Or look for negative cofitness